Evolutionary Biology Group, OxfordBioAfrica

Virus Genotyping Tools
Click in one of the virus on the tree to subtype your sequences.

REGA HIV-1 Subtyping toolREGA HIV-2 Subtyping toolLASP HTLV-1 Subtyping ToolOxford HBV Subtyping toolOxford HCV Subtyping toolREGA Human papillomavirus Subtyping ToolBioAfrica Human herpesvirus 8 Subtyping ToolVirus Genotype Info

Subtyping Tools:


REGA HIV-1 Subtyping Tool (Version 2.0)

REGA HIV-2 Subtyping Tool (Version 1.0)


HTLV-1 Subtyping Tool (Version 1.0)

Dengue, Zika and Chikungunya Subtyping Tool (Version 1.0)


Oxford Hepatitis B virus Subtyping Tool (Version 1.0)

Oxford Hepatitis C virus Subtyping Tool
(Version 1.0)



BioAfrica Human herpesvirus 8 Subtyping Tool (Version 1.0)

REGA Human papillomavirus Subtyping Tool (Version 1.0)



More information about the tools' publications and its developers.

The Virus Genotyping Tools are developed in cooperation between the Africa Centre for Health and Population Studies bioinformatics group, UKZN, South Africawith the Evolutionary Biology Group at University of Oxford, UK., the HIV-1 Pathogenesis and Immunotherapeutics Program at University of Pretoria, South Africa, the Laboratorio Avancado de Saude Publica (LASP) CPqGM/FIOCRUZ, Brazil, and the REGA Institute at the Katholieke Universiteit Leuven, Belgium.

Funded by the Marie Curie Fellowship, Flanders Bilateral Cooperation Program,Wellcome Trust and Royal Society, UK.


For questions, suggestions or problems please contact:  Dr. Tulio de Oliveira.